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Project : SOHO - CDS
Name : NDSPSPEC()
Purpose : Displays all Spectral Windows from specific exposures.
Explanation : The individual Spectral Windows are deselected
into their corresponding positions on the detector.
Line selection and windows given in Blue Book
can be displayed.
Measurements of wavelengths and positions on the
detector is possible together with line identification.
Use : ndspspec,QLDS
Inputs : QLDS: A CDS QL data structure
Opt. Inputs : None.
Outputs : None.
Opt. Outputs: Should return the displayed data for further analyses
and PostScript file. To be written.
Keywords : GROUP_LEADER:
If this invoked by any other CDS QuickLook
display routine (group leader responsible for
keeping the QLDS), this keyword should have
the widget ID of the top level base of the
calling routine.
NOCHECK :
Set to skip QLMGR parameter check.
Calls : ***
ANYTIM2UTC [1], ANYTIM2UTC [2], ASSIGN_NOCOPY, BSCALE, Bell, CDSLOG, CDSNOTIFY
CDS_SLINE, CLIPBOX, CMOUSE, CMOUSE_ACTION, CONCAT_DIR [1], CONCAT_DIR [2]
CONCAT_DIR [3], CW_LOADCT, CW_PSELECT, DATATYPE [1], DATATYPE [2], DATATYPE [3]
DSP_POINT, DSP_RASTER, GT_CDS_TIME, GT_DETY, GT_SCANY, GT_SOLARX, GT_SOLARY, GT_START
LOAD_RED, LOAD_WAVECAL, NDSPEC_DRAW, NDSPEC_LOG, NDSPSPEC_EVENT, NDSP_REDISPLAY
NMAKE_SPEC, PCONVERT, PFIND, PICK_LINE, PIX2WAVE, PQLPROFILE, PQLZOOM, PRESTORE, PS [1]
PS [2], PSPLOT [1], PSPLOT [2], PSTORE, PUT_NLINES, PUT_NSPECTRA, QLDS_CHECKIN
QLDS_REPORT, QLMGR, QL_DIMENSIONS, QL_RD_LLIST, QL_SIZE, SETWINDOW [1]
SETWINDOW [2], TRIM, WIDG_HELP, XLOADCT [1], XLOADCT [2], XLOADCT [3], XMANAGER
XPDMENU, XPS_SETUP, concat_dir [4]
CALLED BY:
DSPSPEC
Common : QLSAVE: See QLDS_CHECKIN
Restrictions: QLDS must be a valid CDS QL data structure
Requires dummy NIS spectrum $CDS_VDS_MODEL/vds_dummy.dat
Looks for line lists in $CDS_PLAN_TECH and $CDS_INFO,
with names 'llist_*'.
For HELP displays the file $CDS_INFO/ndspspec.hlp
Side effects:
Category : QuickLook, Display, NIS
Prev. Hist. : None.
Written : Paal Brekke, 17 November 1993
Modified : SVHH, 20 November 1993
Brushed up documentation.
SVHH & PB, Jan-March 1993
Zoom & Profile added, logging of status line info,
Line identification
SVHH, 16 May 1994
Added call to CONCAT_DIR('$CDS_VDS_MODEL',..)
SVHH, Version 1.5, 30 May 1994
Switched QLPROFILE/QLZOOM -> PQL.../PQL...
SVHH, Version 2, 7 June 1994
Modified cursor action selection,
added on-screen plot of LLIST_??
Added PostScript dump.
PB, July 6, 1994
Added call to help routine QLHELP
PB, August 26, 1994
Changed dety --> detx
detz --> dety in nmake_spect.pro
PB, Sept 21 - 94 Added Help using WIDG_HELP
SVHH, Nov 15, Fixed XTICKS/XRANGE conflict for IDL 3.6c
SVHH, Dec 10, Added CMOUSE/CMOUSE_ACTION functionality,
and added x/y-format/units in PQLZOOM-call.
SVHH, 20-Feb-1995, New data storage format, according
to Bill's note on generating FITS files from
telemetry. Incorporated the use of QL_DIMENSIONS()
to check dimensionality. Should be more robust.
Requires change of EXPSLICE as well.
SVHH, 21-Aug-1995, Version 3
Modified call to QL_SIZE
Version 4, SVHH, 13-December-1995
Started using GT_SCANY.
Version 5, SVHH, 20-December-1995
Added SOLAR_Y axis (left) and moved
the Y index axis to the right. Blanking the
information line when selecting new exposure.
Version5.1, P.B, 20-February-1996
Changed the reading procedure for
VDS_DUMMY now stored in another format.
Line list selection added
Version5.2, P.B, 26-February-1996
Added SOLAR_Y axis in PS mode as well
Writing header info to PS file, and
moved locations of plot
Raster location passed on to IMAGE_TOOL
Version 6, SVHH, 4 March 1996
Fixed a bug in calling gt_solarx/gt_solary/gt_time.
Version 7, SVHH, 12 April 1996
Renamed gt_time -> gt_cds_time
Version 8, SVHH, 14 April 1996
Using LOAD_WAVECAL.
Version 9, SVHH, 20 May 1996
Fixed bug in calculating XIX/TIX from exposure.
Version 10, SVHH, 27 November 1996
Using dsp_point to call IMAGE_TOOL. Changed button
layout etc to have enough space for the exposure
slider even with IDL's standard font. Also improved
color scaling somewhat by taking MISSING into
account.
Version 11, SVHH, 29 January 1997
Made necessary modifications to work (sort of)
with SUMLINE compression.
Version : 11, 29 January 1997
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NAME:
NE2MASS
PURPOSE:
This function converts electron density into mass
CATEGORY:
CME
CALLING SEQUENCE:
Result = NE2MASS (Num_el)
INPUTS:
Num_el: The number of electrons
OUTPUTS:
This function returns the mass corresponding to the electron density.
CALLED BY:
CALC_CME_MASS
PROCEDURE:
MODIFICATION HISTORY:
Written by: R.A. Howard, NRL, 18 September 1996
@(#)ne2mass.pro 1.1 04/18/99 :LASCO IDL LIBRARY
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NAME:
NE_FROM_PB
PURPOSE:
This function does the inversion of a radial fit to pB to electron density.
CATEGORY:
LASCO DATA_ANALYSIS
CALLING SEQUENCE:
NE_FROM_PB,Radii,Q,Coeff,Exps
INPUTS:
Radii: An array of radial points for which the inversion is to be done
Q: The limb darkening parameter (0<1)
Coeff: The coefficients in the fit of pB versus R
Exps: The coefficients in the expansion of pB versus R
OUTPUTS:
This function returns the electron density inverted from the fit of pB.
CALLS: ***
VDHAN [1], VDHAN [2], VDHCOEFF
CALLED BY:
PB_INVERTER
RESTRICTIONS:
The pB fit is assumed to be only of the K-corona. Any F-coronal contribution
must be removed.
PROCEDURE:
The procedure follows the method of van de Hulst, Bull Astron Institutes Netherlands,
vol XI, 2 Feb 1950, pp135-150
EXAMPLE:
MODIFICATION HISTORY:
Written by: RA Howard, NRL, 27 Nov 1998
@(#)ne_from_pb.pro 1.1 11/28/98 LASCO IDL LIBRARY
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NAME: nearest_fid
Purpose: Using the input fid "tfid" find and return the index
to the nearest fid from the list of fileids fids.
Calling Sequence:
ifid = nearest_fid(testfid, fids)
Input:
testfid fileid in the format of yymmdd.hhmm
fids list of file ids
Return:
the index of the nearest file id.
CALLS: ***
fid2ex [1], fid2ex [2], int2secarr [1], int2secarr [2]
CALLED BY:
GetRng
History: written 6-May-94...
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SAMPLE CALLING SEQUENCE:
new_disp_sci5k, '1-Jun-97'
new_disp_sci5k, '2-Jul-97', disp_size=256, dpc_filter='168*', win_size=400
CALLS: ***
CONCAT_DIR [1], CONCAT_DIR [2], CONCAT_DIR [3], CONGRID [1], CONGRID [2]
CONGRID [3], GET_MDI_SCALE, LOADCT, MEAN, RFITS [1], RFITS [2], RFITS [3]
SCI5K_DISP_IMG, SSW_FILE_DELETE, STDDEV, SXPAR [1], SXPAR [2], SXPAR [3]
anytim2ex [1], anytim2ex [2], anytim2ints [1], anytim2ints [2], concat_dir [4]
data_type [1], data_type [2], ex2fid [1], ex2fid [2], fid2ex [1], fid2ex [2]
file_list [1], file_list [2], fmt_tim [1], fmt_tim [2], get_dpc_info
int2secarr [1], int2secarr [2], mk_dpc_image, str_replace [1], str_replace [2]
tim2dset [1], tim2dset [2], tv2 [1], tv2 [2], wc_where [1], wc_where [2]
xyouts2 [1], xyouts2 [2], zbuff2file [1], zbuff2file [2]
HISTORY:
Written Feb-96 by M.Morrison
14-Mar-96 (MDM) - Added "missing" keyword option
- Dropped the last data point from the scaling
2-Apr-96 (MDM) - Scale only for the range of values which are non -32768 (missing)
- let missing be 0 by default
- display the min/max excluding the missing
28-May-96 (MDM) - Added special handling of LOI image
12-Sep-96 (MDM) - Modified to not grab the image on the edge
of the requested time since it is probably
incomplete
14-Apr-97 (MDM) - Added call to GET_MDI_SCALE to force magnetogram scaling
2-Jul-97 (MDM) - Added DISP_SIZE and DPC_FILTER options, WIN_SIZE
27-May-99 (RIB) - Selected only 0* and 168* dpcs
8-Oct-99 (RIB) - Reworked to allow gif image output, renamed to new_disp_sci5k
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SAMPLE CALLING SEQUENCE:
new_disp_sci5k, '1-Jun-97'
new_disp_sci5k, '2-Jul-97', disp_size=256, dpc_filter='168*', win_size=400
CALLS: ***
CONCAT_DIR [1], CONCAT_DIR [2], CONCAT_DIR [3], CONGRID [1], CONGRID [2]
CONGRID [3], GET_MDI_SCALE, LOADCT, MEAN, RFITS [1], RFITS [2], RFITS [3]
SCI5K_DISP_IMG, SSW_FILE_DELETE, STDDEV, SXPAR [1], SXPAR [2], SXPAR [3]
anytim2ex [1], anytim2ex [2], anytim2ints [1], anytim2ints [2], concat_dir [4]
data_type [1], data_type [2], ex2fid [1], ex2fid [2], fid2ex [1], fid2ex [2]
file_list [1], file_list [2], fmt_tim [1], fmt_tim [2], get_dpc_info
int2secarr [1], int2secarr [2], mk_dpc_image, str_replace [1], str_replace [2]
tim2dset [1], tim2dset [2], tv2 [1], tv2 [2], wc_where [1], wc_where [2]
xyouts2 [1], xyouts2 [2], zbuff2file [1], zbuff2file [2]
HISTORY:
Written Feb-96 by M.Morrison
14-Mar-96 (MDM) - Added "missing" keyword option
- Dropped the last data point from the scaling
2-Apr-96 (MDM) - Scale only for the range of values which are non -32768 (missing)
- let missing be 0 by default
- display the min/max excluding the missing
28-May-96 (MDM) - Added special handling of LOI image
12-Sep-96 (MDM) - Modified to not grab the image on the edge
of the requested time since it is probably
incomplete
14-Apr-97 (MDM) - Added call to GET_MDI_SCALE to force magnetogram scaling
2-Jul-97 (MDM) - Added DISP_SIZE and DPC_FILTER options, WIN_SIZE
27-May-99 (RIB) - Selected only 0* and 168* dpcs
8-Oct-99 (RIB) - Reworked to allow gif image output, renamed to new_disp_sci5k
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Name: new_dpath
Purpose: update data paths common area
Input Parameters:
inpath - string or string array of paths to add (or remove)
Keyword Parameters:
remove - switch, if set, remove instead of add
home - switch, if set, include home directory (add/remove)
current - switch, if set, include current directory (add/remove)
prepend - switch, if set, users new stuff comes first
init - switch, if set, re-initiailize before adding new path(s)
empty - switch, if set, empty before adding new path(s)
-- NOTE:initialize=system defaults, empty=empty --
loud - switch, if set, extra messages
file - two options: if switch set, read file: HOME/setup.ysdpaths
if string, read paths from specified file
save - switch, if set, save current dpaths to HOME/setup.ysdpaths
Calling Examples:
new_dpath ; add current directory
new_dpath,/current,/home ; same plus home directory
new_dpath,'/usr/name/data' ; add named path/path arrray
new_dpath,'/usr/name/data',/prepend ; same, but first, not last
new_dpath,'/usr/name/data',/remove ; remove named path/path array
new_dpath,/init ; reinitialize (system defaults)
new_dpath,/empty,/current ; empty and add current
new_dpath,data_paths(),/remove ; same as empty
new_dpath,/file ; adds whatever paths are listed
; in file: HOME/setup.ysdpaths
new_dpath,/save ; save current paths in file:
; HOME/setup.ysdpaths
Restrictions: proto-routine uses common block, not system variables
todo - add recursive (+path) feature??
CALLS: ***
CONCAT_DIR [1], CONCAT_DIR [2], CONCAT_DIR [3], DATA_PATHS, concat_dir [4]
curdir [1], curdir [2], file_append [1], file_append [2], file_info2 [1]
file_info2 [2], rd_tfile [1], rd_tfile [2], rem_elem [1], rem_elem [2], uniqo [1]
uniqo [2]
Common Blocks:
data_paths - contains string array of data paths
History:
slf - 7-may-93
slf - 8-may-93 add file keyword and function
slf - 9-may-93 changed default file name to setyp.ysdpaths
changed default-to-add-current-path restrictions
slf - 20-may-93 improved save option (call uniqo,file_delete)
slf - 22-may-93 add doc header terminator
slf - 26-may-93 read of DIR_SITE_SETUP/setup.ysdpaths on init
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NAME:
new_edac_summary
PURPOSE:
To plot the EDAC error rates
SAMPLE CALLING SEQUENCE:
new_edac_summary, '0*_*000.fits', sttim='1-feb',entim='2-feb', log_list='edac_summary'
CALLS: ***
BREAK_FILE [1], BREAK_FILE [2], BREAK_FILE [3], LOADCT, RFITS2 [1], RFITS2 [2]
SSW_FILE_DELETE, SXPAR [1], SXPAR [2], SXPAR [3], UNSIGN, UTPLOT [1], UTPLOT [2]
UTPLOT [3], UTPLOT [4], UTPLOT [5], UTPLOT [6], anytim2ints [1], anytim2ints [2]
break_file [4], fid2ex [1], fid2ex [2], file_list [1], file_list [2], fmt_tim [1]
fmt_tim [2], plottime [1], plottime [2], sel_filetimes [1], sel_filetimes [2]
tv2 [1], tv2 [2], ut_time [1], ut_time [2], zbuff2file [1], zbuff2file [2]
HISTORY:
Written May 2001 by R. Bush based on edac_summary
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PROJECT:
SOHO - CDS/SUMER
NAME:
NEW_EDIT_ITEM()
PURPOSE:
Rearrange REQ_ITEMS in CUSTOM_STC
CATEGORY:
Utitility, Planning
EXPLANATION:
SYNTAX:
Result = new_edit_item(custom_stc, new_item)
CALLED BY:
MK_CDS_PLAN
EXAMPLES:
IF new_edit_item(custom_stc, 'CDS-SCI') NE 0 THEN ...
INPUTS:
CUSTOM_STC - Customization strcuture that has a tag REQ_ITEMS
as a string array listing items to be plotted; will
be modified upon a successful return.
NEW_ITEM - String of plan item to be edited
OPTIONAL INPUTS:
None.
OUTPUTS:
RESULT - 1 if NEW_ITEM can be made editable, 0 otherwise
Note: CUSTOM_STC is modified upon a successful return
OPTIONAL OUTPUTS:
None.
KEYWORDS:
None.
CALLS: ***
DATATYPE [1], DATATYPE [2], DATATYPE [3], REP_TAG_VALUE
COMMON:
None.
RESTRICTIONS:
None.
SIDE EFFECTS:
CUSTOM_STC is changed upon a successful return.
HISTORY:
Version 1, August 29, 1995, Liyun Wang, GSFC/ARC. Written
CONTACT:
Liyun Wang, GSFC/ARC (Liyun.Wang.1@gsfc.nasa.gov)
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Project : SOHO - CDS
Name : NEW_FF_DEMO
Purpose : Demonstrates application of Flat Field and its effects
Explanation : When the ground based flat field is applied to raw data
a considerable improvement in image quality it seen. However
for those regions where in-flight data are available they are
shown to improve the data still further. The effect of these
corrections on line profile fitting is also shown.
Use : IDL> new_ff_demo
Inputs : None
Opt. Inputs : None
Outputs : None
Opt. Outputs: None
Keywords : None
Calls : ***
CIRCLE_SYM, CONCAT_DIR [1], CONCAT_DIR [2], CONCAT_DIR [3], EXPTV, YES_NO
concat_dir [4]
Common : None
Restrictions: None
Side effects: None
Category : Calibration
Prev. Hist. : None
Written : C D Pike, RAL, 12-Nov-96
Modified :
Version : Version 1, 12-Nov-96
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NAME:
new_mon_health
PURPOSE:
To generate the health monitoring data
CALLS: ***
LOADCT, MONH_GENERAL, MONH_HK_PLOT, MONH_IMAGES, MONH_IMAGES_RANGE, MONH_LOI_IMG
MONH_LOI_PLOT, MONH_OUTFIL, RD_LOI_MMAD, RFITS [1], RFITS [2], RFITS [3], RFITS2 [1]
RFITS2 [2], SSW_FILE_DELETE, SXPAR [1], SXPAR [2], SXPAR [3], UNIQ [1], UNIQ [2]
UNIQ [3], UTPLOT [1], UTPLOT [2], UTPLOT [3], UTPLOT [4], UTPLOT [5], UTPLOT [6]
anytim2ints [1], anytim2ints [2], file_list [1], file_list [2], fmt_tim [1]
fmt_tim [2], int2secarr [1], int2secarr [2], mk_dpc_image, plot_pzt_corr
plottime [1], plottime [2], quick_hkplot [1], quick_hkplot [2], sxpar2 [1]
sxpar2 [2], tv2 [1], tv2 [2], ut_time [1], ut_time [2], xyouts2 [1], xyouts2 [2]
zbuff2file [1], zbuff2file [2]
HISTORY:
Written 8-Dec-99 by R. Bush
Based on mon_health.pro written by M. Morrison
5-Oct-99 (RIB) - Complete restructuring of the output options
5-Jan-2000 (RIB) - Version ready for long term testing
16-Aug-2006 (SEG) - Adding check for CROT=180 to correct for roll
for 160k latest image, not for 5k images
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NAME:
new_mon_health
PURPOSE:
To generate the health monitoring data
CALLS: ***
LOADCT, MONH_GENERAL, MONH_HK_PLOT, MONH_IMAGES, MONH_IMAGES_RANGE, MONH_LOI_IMG
MONH_LOI_PLOT, MONH_OUTFIL, RD_LOI_MMAD, RFITS [1], RFITS [2], RFITS [3], RFITS2 [1]
RFITS2 [2], SSW_FILE_DELETE, SXPAR [1], SXPAR [2], SXPAR [3], UNIQ [1], UNIQ [2]
UNIQ [3], UTPLOT [1], UTPLOT [2], UTPLOT [3], UTPLOT [4], UTPLOT [5], UTPLOT [6]
anytim2ints [1], anytim2ints [2], file_list [1], file_list [2], fmt_tim [1]
fmt_tim [2], int2secarr [1], int2secarr [2], mk_dpc_image, plot_pzt_corr
plottime [1], plottime [2], quick_hkplot [1], quick_hkplot [2], sxpar2 [1]
sxpar2 [2], tv2 [1], tv2 [2], ut_time [1], ut_time [2], xyouts2 [1], xyouts2 [2]
zbuff2file [1], zbuff2file [2]
HISTORY:
Written 8-Dec-99 by R. Bush
Based on mon_health.pro written by M. Morrison
5-Oct-99 (RIB) - Complete restructuring of the output options
5-Jan-2000 (RIB) - Version ready for long term testing
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PROJECT:
SOHO - CDS
NAME:
NEW_SPIKE
CATEGORY:
General utility.
PURPOSE:
Remove cosmic ray hits from CDS-NIS data-sets.
EXPLANATION:
A revised version of the routine CLEAN_SPIKE.PRO which applies a
very similar technique for finding the cosmic rays, but is
significantly quicker. This extra speed is made by using the IDL
CONVOL routine.
The fundamental philosophy of this routine lies in identifying
pixels that have a significant strength when compared with
neighbouring exposures. Sometimes, however, such a method will
flag real data as a cosmic ray, e.g., if a strong brightening
suddenly appears in the data. Such a brightening is different from
a cosmic ray in that it will be continuous in detector-X and Y
directions, and so this routine only flags a cosmic ray if a spike
is also seen in one of the detector-X or detector-Y directions.
The checks made in the detector-Y direction are not simply with
nearest neighbour, but also with pixels one away. The criteria are
more stringent for this test, however.
An additional check is made by comparing a pixel value with the
median value of a 5x5 array of (detector-Y x exposure) array pixels.
If the pixel is flagged and a spike is seen in both the detector-Y
and detector-X directions, then the pixel is identified as a cosmic
ray. This is useful if there are a lot of cosmic rays in the data.
CALLED BY:
CDS_NEW_SPIKE, NIS_QUICKLOOK
EXAMPLE:
Create a 3-D NIS array and clean:
qlds=readcdsfits('s3073r00')
data=gt_windata(qlds,0)
new_spike,data,data_clean,/neighbours,/info
INPUTS:
IN_ARRAY - A 3D array, with exposures assumed to be contained
in the 2nd dimension.
OPTIONAL INPUTS:
MISSING - The value for missing data (default=-100.)
OPTIONAL OUTPUTS:
OUT_ARRAY - The output, cleaned array
SWTCH - An integer array of the same size as IN_ARRAY,
containing 1's at the position of cosmic rays
and 0's elsewhere.
KEYWORDS:
NEIGHBOURS - Flag the detector-X and detector-Y nearest neighbours
to the cosmic rays.
FILL - Replace the cosmic ray intensity values with the
median of the surrounding 5x5 pixel area.
INFO - Display the number of cosmic rays found.
CALLS: ***
FMEDIAN
RESTRICTIONS:
The data should be de-biassed before using NEW_SPIKE.
The smallest dimensions possible for IN_ARRAY are (4,3,6) for the
array (det-X,exp,det-Y).
Occasional cosmic rays appear as `blocks' of size 2x2 or 3x3 pixels,
and may not be completely cleaned by NEW_SPIKE.
Some weak, single-pixel events are not removed, although their
signals should not be a problem.
Some cosmic rays that hit the peak of a line profile are not
removed. This seems to be because, if the signal in the line is
strong, say 300, then the cosmic ray is required to give a total
signal of at least 510 in order to be flagged, and so some quite
significant events are skipped over.
PROGRAMMING NOTES
David Brooks pointed out that real solar data was being removed when
data-set s25413r43 was cleaned. The particular data in question is
in the O V window (gt_windata(qlds,2)), and the profile ov[*,1,19].
The problem lies in the fact that this data is binned in the
Y-direction. All the tests I had done were on normal, unbinned data
(Y-binning was not used until around mid-1998 for CDS). The parameters
I had set up for determining cosmic rays (CUTOFF and BCKGRND)
unintentionally assumed a certain 'smoothness' in the data that is
due to the CDS PSF being broader than the pixel size. I.e., real
data should never show sharp spikes because of the PSF, and so must
be cosmic rays. When binning in the Y-direction, the Y-pixel size
becomes closer to the width of the PSF and so real data-spikes do
become possible, as witnessed by the above data-set.
I have now increased CUTOFF to 0.65, but also defined XCUTOFF and
YCUTOFF (where X, Y are the detector axes) to be 0.8*CUTOFF, i.e.,
I've *lowered* the threshold. When the keyword /YBIN is set
YCUTOFF=CUTOFF, increasing the threshold in this case, making it
harder to flag spikes when there is Y-binning.
The lowering of the threshold in the X and Y directions flags a few
more cosmic rays, but does not (from the tests I've done) remove real
data.
In the Y-direction, NEW_SPIKE checks next-neighbours for reasons
explained above. When /YBIN is set I now change the cutoff to be
YCUTOFF*3 rather than YCUTOFF*2, as next-neighbours become less
important when binning.
HISTORY:
Ver. 1 - PRY, 18-Aug-98
Ver. 2 - PRY, 2-Sep-98, if all pixels in an array have intensities
less than 50 or greater than 50, then an error was
generated. This is now corrected.
Ver. 3 - PRY, 4-Sep-98, if med_array was 0. at some pixel, then
arithmetic errors were generated for some rasters.
Corrected this.
Ver. 4 - PRY, 16-Nov-98, if ind was empty, then routine crashed.
Now corrected.
Ver. 5 - PRY, 2-Feb-99, corrected another problem with ind
Ver. 6 - Danielle Bewsher, 9-May-01, corrected problem with switch
for compatability with IDL 5.4
Ver. 7 - PRY, 20-Feb-03
Flags problem when IN_ARRAY is too small.
Also, if there are less than 5 exposures the program
switches to using a 3x7 median filter rather than the 5x5
filter.
Ver. 8 - PRY, 21-Jul-03
Program was not returning the SWTCH array, so corrected
this now.
Ver. 9 - PRY, 15-Aug-03
Added YBIN= keyword, and modified the parameters that
identify a cosmic ray. See Programming Notes above.
CONTACT:
Peter Young, Rutherford Appleton Laboratory, p.r.young@rl.ac.uk
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Name: new_version
Purpose: construct new file name using VMS-like syntax
Input Parameters:
filename - string containing current file name (may include path)
Optional Keyword Paramters:
move - if switch (=1) then change name (move) on same path
if string pathname, copy new file to move with new name
Output Paramters:
function returns new file name (including path)
CALLS: ***
BREAK_FILE [1], BREAK_FILE [2], BREAK_FILE [3], CONCAT_DIR [1], CONCAT_DIR [2]
CONCAT_DIR [3], REVERSE, break_file [4], concat_dir [4], curdir [1], curdir [2]
file_list [1], file_list [2]
CALLED BY:
add_pro [1], add_pro [2]
Side effects:
if move or copy keywords set, new file is written to specified path
(otherwise, filename is constructed but no file action is taken)
Restrictions:
unix only for now?
assumes all charcters after the semicolon represent the integer
version number
History:
slf, 1-Dec-1992
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Name: newfiles
Purpose: return file name(s) of new data
Calling Sequence:
files=newfiles( [nfiles, /sfd, /sfr, /spd, /spr, /bda, /wda, /hda
,oldfiles=oldfiles]
Optional Keyword Parameters:
CALLS: ***
STR2ARR [1], STR2ARR [2], file_list [1], file_list [2], gbo_paths [1]
gbo_paths [2], uniq_fid [1], uniq_fid [2], wmenu_sel [1], wmenu_sel [2]
CALLED BY:
FIRST_LIGHT [1], FIRST_LIGHT [2], LATEST_SFDS_GIF, QUICKSTRAY [2], chk_pointing
daily_forecast [2], first_bcs, fl_goesplot [1], fl_goesplot [2], fl_goesplot [3]
fl_sxtobsnar [1], fl_sxtobsnar [2], last_lc, lastspd, ref_term [2], sxt2mpeg
xspr [1], xspr [2]
History:
10-sep-1993 (SLF) extracted and genericized code from newsfd.pro
4-Mar-1994 (SLF) print warning if no files
9-Mar-1994 (SLF) fix bug when last keyword not used
16-sep-1994 (SLF) expanded to GBO data
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Project : SOHO - CDS
Name : NEXPOSURES()
Purpose : Return the number of "exposures" in a QLDS
Explanation : Returns the number of exposures, defined as the
size of the larger of the DEL_TIME and the SSOLAR_X
dimensions.
Use : NEXP = NEXPOSURES(QLDS)
Inputs : QLDS: A "CDS QL data strucure"
Opt. Inputs : None.
Outputs : Ret.value.
Opt. Outputs: None.
Keywords : NOCHECK:
Set to avoid checking with QLMGR whether
the QLDS is acceptable. Set to speed up...
Calls : ***
QLMGR, QL_DIMENSIONS
CALLED BY:
DSPEXP, DSPWAV
Common : None.
Restrictions: QLDS == QL data structure.
Side effects: None.
Category : CDS, QuickLook
Prev. Hist. : Used to be called nraster, but change of terminology
(RASTER -> EXPOSURE) prompted name change.
Written : Stein Vidar Hagfors Haugan, October 1993.
Modified : SVHH, 6-March-1995, Altered to use the ql_dimensions()
routine after altering the data format slightly.
Version : 1.1, 6-March-1995
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Name: next_window
Purpose: return next available window number, so they can be known in advance
(one use is to allow window Title which include this# prior to window creation)
Calling Sequence:
wind=next_window( [/free, /user] )
Calling Examples:
wind=next_window(/free) ; IDL will use this for next /free
wind=next_window(/user) ; next explicit avail (0-31)
wdef,zz,512,512,title='My Title' + next_window(/free,/label)
(create a window with defined title which includes window number for info)
CALLED BY:
FIG_OPEN, FIRST_LIGHT [1], FIRST_LIGHT [2], FWD_DECOMPOSE, FWD_DEC_GAUSS
FWD_MINIMUM, HSI_MAP_CLEAN [1], HSI_MEM_SATO [1], show_contacts, xanal_emi
xdisp_fits, xdisp_trace [1], xdisp_trace2, xdisp_trace3
History:
7-oct-1994 (SLF)
Restrictions:
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Project : SOHO - CDS
Name : NIMCP_DEPTH_FUNCT()
Purpose : Function used by GET_NIMCP
Category : Class4, Calibration
Explanation : Function used by GET_NIMCP to express the VDS burn-in depth as
an exponential decline. Called by GET_NIMCP.
Syntax : Result = NIMCP_DEPTH_FUNCT(DTAI, PD [, PDERIV ])
CALLED BY:
CDS_SLIT6_BURNIN, DISPLAY_CDS_BURNIN, GET_NIMCP, VDS_BURNIN_NEW
Examples :
Inputs : DTAI = Number of TAI seconds since 1995-12-02T00:00:00Z.
PD = The parameters of the function. Can also be an array
of parameters of dimensions (3,N)
Opt. Inputs : None.
Outputs : None.
Opt. Outputs: PDERIV = A placeholder to make LSTSQR work, this always
returns zero.
Keywords : None.
Calls : None.
Common : None.
Restrictions: None.
Side effects: None.
Prev. Hist. : None.
History : Version 1, 25-Feb-1997, William Thompson, GSFC
Version 2, 06-Aug-1997, William Thompson, GSFC
Allow DTAI to be a vector.
Contact : WTHOMPSON
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FUNCTION: nimg_in_tfr, fnam
Returns number of images in a data set
CALLS: ***
NIMG_IN_TFR, dec2sun [1], dec2sun [2], get_host [1], get_host [2], mk_tfi
HISTORY:
17-Mar-94 (MDM) - Renamed from NUM_IMAGES to NIMG_IN_TFR
- Added a FREE_LUN call
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FUNCTION: nimg_in_tfr, fnam
Returns number of images in a data set
HISTORY:
17-Mar-94 (MDM) - Renamed from NUM_IMAGES to NIMG_IN_TFR
- Added a FREE_LUN call
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FUNCTION: nimg_in_tfr, fnam
Returns number of images in a data set
HISTORY:
17-Mar-94 (MDM) - Renamed from NUM_IMAGES to NIMG_IN_TFR
- Added a FREE_LUN call
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Project : SOHO - CDS
Name : NIS1_RELCAL
Purpose : Demonstrate possible NIS1 relative intensity calibration.
Explanation : Using pairs of density insensitive lines the relative
intensity calibration for the NIS1 waveband was bootstrapped
from the short wavelength lines.
Use : IDL> nis1_relcal
Inputs : None
Opt. Inputs : None
Outputs : None
Opt. Outputs: None
Keywords : None
Calls : ***
CIRCLE_SYM, POLY, POLY_FIT
Common : None
Restrictions: None
Side effects: None
Category : Demonstration, intensity, calibration
Prev. Hist. : None
Written : C D Pike, RAL, 16-Aug-96
Modified :
Version : Version 1, 16-Aug-96
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Project : SOHO - CDS
Name : NIS2_RELCAL
Purpose : Demonstrate possible NIS2 relative intensity calibration.
Explanation : Using pairs of density insensitive lines the relative
intensity calibration for the NIS2 waveband was bootstrapped
from the long wavelength lines.
Use : IDL> nis2_relcal
Inputs : None
Opt. Inputs : None
Outputs : None
Opt. Outputs: None
Keywords : None
Calls : ***
CIRCLE_SYM, POLY, POLY_FIT
Common : None
Restrictions: None
Side effects: None
Category : Demonstration, intensity, calibration
Prev. Hist. : None
Written : C D Pike, RAL, 16-Aug-96
Modified :
Version : Version 1, 16-Aug-96
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Project : SOHO - CDS
Name : NIS_AVG_SPECT_DEMO
Purpose : Demonstrate the NIS average quiet sun spectra.
Category : Class2, CDS, Calibration, Spectrum
Explanation : This routine demonstrates the average spectra which were
obtained by combining a large number of NISAT_S runs which were
taken over a several month period. These date are stored in
the files:
avg_qs_nis1_debias.fts
avg_qs_nis2_debias.fts
avg_qs_nis1_calib.fts
avg_qs_nis2_calib.fts
which should be in the $CDS_NIS directory. The first two files
contain the average of spectra which have only had the
VDS_DEBIAS routine applied to them, while the last two have had
NIS_CALIB applied. What is shown in this routine is the
average along the slit, but the files contain complete slit
images.
Possible uses of these data are:
* Serving as a baseline average quiet sun spectrum to compare
other data against.
* Measuring the tilt, possibly as a function of wavelength,
since any solar effects should be washed out by the large
number of spectra which were averaged together.
* Measuring any non-uniformities in slit 4, i.e. features in
the velocity or intensity which can be replicated from line
to line.
One effect that this data demonstrates is that there is some
constant background which is not yet accounted for in our
calibration. Possibly this is due to scattered Lyman alpha
radiation in the spectrograph. The dashed lines in the second
set of plots shows the effect of the calibration software on a
uniform background.
Syntax : NIS_AVG_SPECT_DEMO
Examples : To send to a PostScript printer, use the following sequence:
PS
NIS_AVG_SPECT_DEMO
PSPLOT
Inputs : None.
Opt. Inputs : None.
Outputs : None.
Opt. Outputs: None.
Keywords : None.
Calls : ***
AVERAGE, FIND_WITH_DEF [1], FIND_WITH_DEF [2], FIND_WITH_DEF [3], FXREAD [1]
FXREAD [2], GET_WAVE_EFF, PIX2WAVE, POLY, SETVIEW [1], SETVIEW [2], YES_NO
Common : None.
Restrictions: The FITS files must exist. Also, the wave_eff database must be
accessible.
Side effects: None.
Prev. Hist. : None.
History : Version 1, 4-Oct-1996, William Thompson, GSFC.
Contact : WTHOMPSON
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Project : SOHO - CDS
Name : NIS_BIAS_DEMO
Purpose : Demonstrates NIS bias levels from daily synoptic scans.
Explanation : The NIS bias levels drift slowly with time and sometimes
is subject to sudden changes. These plots not only
show the slow trends but also the glitches as deduced
from the daily synoptic scans.
Use : IDL> nis_bias_demo
Inputs : None
Opt. Inputs : None
Outputs : None
Opt. Outputs: None
Keywords : None
Calls : ***
ANYTIM2UTC [1], ANYTIM2UTC [2], CIRCLE_SYM, CONCAT_DIR [1], CONCAT_DIR [2]
CONCAT_DIR [3], OUTPLOT [1], OUTPLOT [2], OUTPLOT [3], UTPLOT [1], UTPLOT [2]
UTPLOT [3], UTPLOT [4], UTPLOT [5], UTPLOT [6], concat_dir [4]
Common : None
Restrictions: None
Side effects: None
Category : Calibration
Prev. Hist. : None
Written : C D Pike, RAL, 13-Nov-96
Modified : Latest data, complete to 24-Jul-97. 28-Jul-97
complete to 28-May-98
added a bit of post-recovery data
added data to May 2000
Version : Version 2, 28-Jul-97
Version 3, 29-May-98
Version 4, 13-Nov-98
version 5, 17-May-00
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Project : SOHO - CDS
Name : NIS_CALIB
Purpose : Applies calibration factors to NIS images.
Explanation : Applies the calibration factors for the NIS spectrograph to CDS
data. The resulting data is then in physical units. If the
calibration routines for the VDS detector, VDS_DEBIAS and
VDS_CALIB, have not already been called, then this routine will
call them automatically.
A number of databases are consulted to retrieve calibration
parameters to apply to the data. These databases are found in
the "calib" subdirectory of the CDS database tree.
The default units for the returned data are
PHOTONS/CM^2/SEC/ARCSEC^2
However, there are other options, which are controllable
through keywords. For example, using the call
NIS_CALIB, DATA, /ERGS, /STERAD, /ANG
would return the data in the units
ERGS/CM^2/SEC/STERAD/ANGSTROM
Note, however, that the /ANGSTROM keyword is ignored for
certain data, as explained below.
It's important to realize that the units (without /ANGSTROM)
only apply when all the data in the line profile is added
together.
Use : NIS_CALIB, DATA
Inputs : DATA = Structure variable as read by READCDSFITS.
Opt. Inputs : None.
Outputs : DATA = The calibrated data will be returned as a new
structure variable with the same format as the input.
Opt. Outputs: None.
Keywords : There are a number of options for the units that the data can
be returned in. The following keywords can be used to control
the units. The default is "PHOTONS/CM^2/SEC/ARCSEC^2".
ERGS = If set, then the data is returned in units of ergs
instead of photons.
STERADIANS = If set, then the data is returned as per steradian
instead of per arcsecond^2.
ANGSTROMS = If set, then the data is returned as per Angstrom.
This keyword is ignored when the data has been
summed over wavelength (SUMLINE or SUMWIN
compression) or when the instrument is operated in
spectroheliogram mode with the 90x240 arcsecond
slit.
Additional keywords are:
SLITVAR = If set, then the instrumental intensity variation
along the slit will be removed from the data.
As of 21 September 1999, the default is for SLITVAR
to be set. To not apply this correction, use
SLITVAR=0.
SECOND_ORDER = If set, then the second-order correction is
applied to the data rather than the first order
correction. The best way to use this is to first
make a copy of the data, and then apply the first
order correction to one copy, and the second order
correction to the other, e.g.
VDS_CALIB, DATA
DATA2 = COPY_QLDS(DATA)
NIS_CALIB, DATA, ...
NIS_CALIB, DATA2, /SECOND_ORDER, ...
*** WARNING *** When this keyword is used, all
NIS-2 windows are processed in second order.
ERRMSG = If defined and passed, then any error messages will
be returned to the user in this parameter rather than
depending on the MESSAGE routine in IDL. If no
errors are encountered, then a null string is
returned. In order to use this feature, ERRMSG must
be defined first, e.g.
ERRMSG = ''
NIS_CALIB, ERRMSG=ERRMSG, ...
IF ERRMSG NE '' THEN ...
In addition, any keyword used by VDS_CALIB can also be passed,
such as /SLIT6.
Calls : ***
Bell, DATATYPE [1], DATATYPE [2], DATATYPE [3], DETDATA, DETDESC, FILL_MISSING
FIND_WITH_DEF [1], FIND_WITH_DEF [2], FIND_WITH_DEF [3], GET_EFFICIENCY
GET_EFF_AREA, GET_VDS_SLITPOS, GET_WAVE_EFF, PIX2WAVE, POLY, REARRANGE, ST_WINDATA
TRIM, VDS_CALIB
CALLED BY:
MK_CDS_ANALYSIS
Common : None.
Restrictions: Before this procedure can be used, the calibration for the VDS
detector must be applied, via the VDS_DEBIAS and VDS_CALIB
routines. If not already done, then this routine will attempt
to use the automatic facilities of those routines.
Side effects: None.
Category : Calibration, NIS, Intensity.
Prev. Hist. : None.
Written : William Thompson, GSFC, 16 September 1996
Modified : Version 1, William Thompson, GSFC, 16 September 1996
Version 2, William Thompson, GSFC, 22 October 1996
Call MESSAGE with /CONTINUE
Version 3, William Thompson, GSFC, 28 October 1996
Only use /CONTINUE if data has already been calibrated.
Version 4, William Thompson, GSFC, 21 January 1997
Corrected bug when only one exposure was taken.
Version 5, William Thompson, GSFC, 4 August 1997
Change units of all windows
Version 6, William Thompson, GSFC, 9 October 1998
Added keyword SLITVAR
Version 7, William Thompson, GSFC, 2 September 1999
Allow all VDS_CALIB keywords to pass through.
Version 8, William Thompson, GSFC, 21 September 1999
Provide error message if cdhsstate database not found
Make /SLITVAR the default.
Version 9, William Thompson, GSFC, 07-Aug-2002
Added keyword SECOND_ORDER
Version : Version 9, 07-Aug-2002
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Project : SOHO - CDS
Name : NIS_IN_WINDOW()
Purpose : Decide which NIS line_window cursor is in, if any.
Explanation : In the technical planning display, decide whether the current
cursor position falls within the bounds of any of the currently
defined NIS line windows.
Use : IDL> hit = nis_in_window(line_structure, cur_x, cur_y)
Inputs : line_structure - the data structure containing details of the
currently defined line windows list. The
structure is defined in tp_def_struct.
cur_x - the current x-value of the cursor position.
cur_y - the current y-value of the cursor position.
Opt. Inputs : None
Outputs : The function return value is the number of the identified
line-window. A value of -1 is returned if the cursor position
is not within a window.
Opt. Outputs: None
Keywords : None
Calls : None
CALLED BY:
MK_RASTER
Restrictions: Returns only the first line-window found, tough on overlapping
windows.
Side effects: None
Category : Technical planning
Prev. Hist. :
Written : C D Pike, RAL, 14-May-93
Modified :
Version : Version 1, 14-May-1993
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Name:
NIS_MRGDATA
Purpose:
Merge continguous/overlapping windows in a CDS/NIS raster
Calling sequence:
qlm=NIS_MRGDATA(ql [ , /NOCHECK ] )
Input:
ql : CDS QLDS (Quick Look Data Structure)
Keyword parameters:
NOCHECK= (0/1) check whether the input structure is a valid QLDS
Output:
qlm: new QLDS structure
Common blocks:
None
Calls: ***
COPY_QLDS, GT_DETECTOR, GT_DIMENSION, GT_NUMWIN, GT_WINDATA, QLMGR, REP_TAG_VALUE
ST_WINDATA, TRIM
Side effects:
In some instances the Y-size of some windows is increased too, due
to a different offset in the overlapping windows (<- spectral slant).
The Y-size of all other windows is adjusted accordingly. For the
future, it might be worth considering letting the Y-size vary as
well (perhaps adding a PADDING keyword too).
Restrictions:
- Only works on NIS data with 3 (WAVELNTH,SOLAR_X,SOLAR_Y) or 4
dimensions (WAVELNTH,SOLAR_X,SOLAR_Y,DEL_TIME).
- Assumes that pixels in the common areas of overlapping windows have
the same values (but allowing for data drop-outs in one of the
windows). If data have been processed with, e.g., VDS_DEBIAS, VDS_CALIB
or NIS_CALIB (keyword ANGSTROM=0), that should be strictly true; the
use of VDS_ROTATE and such, on the other hand, obviously invalidates
this assumption.
Also, if data have been binned, there might be problems with offsets
between windows of sub-(binned-)pixel resolution. Example: a 35-pixels
wide window starts at (X,Y)=(524,576), while the next one, because of
the spectral slant on the detector, starts at (558,577). The last
column of the first window overlaps with the first column of the
second, but offset of 1 pixel in the Y direction on the detector.
If data are binned in pairs in the Y direction, the bottom-right binned
data element in the first window is the sum of detector pixels
(524,576) and (524,577), while the corresponding (bottom-left) binned
data element in the second window is the sum of pixels (524,577)
and (524,578).
Modification history:
V. Andretta (15/Dec/1997): Written; based on older routine MRG_NISDATA
V. Andretta (19/Jan/1998): Take into account binning (BINX/Y);
Allows for time sequences.
v1.0 V. Andretta (19/Jan/1998): Allows for header-only QLDS (read with
/HEADER keyword from READCDSFITS)
v2.0 V. Andretta (26/Oct/1998): Eliminated duplicated call to COPY_QLDS
v3.0 V. Andretta (23/Aug/2000): Fixed some problems appearing with binned
data.
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Project : SOHO - CDS
Name : NIS_PIX_ANALYSE
Purpose : Complementary routine to NIS_QUICKLOOK. Allows the spectrum
from an image pixel chosen in NIS_QUICKLOOK to be viewed.
Also works as a stand-alone routine.
Category : Data analysis
Explanation : On passing the data structure, A, and a co-ordinate (X,Y),
the NIS spectrum for that pixel is extracted. A simple menu
allows this spectrum to be viewed in detail.
The window number from which the original image was extracted
is passed so that, on selecting a pixel in the image, you
are first presented with a view of this portion of the
spectrum.
Syntax : NIS_PIX_ANALYSE, A, XIX, YIX, WIN_NO
CALLED BY:
NIS_QUICKLOOK
Examples :
Inputs : A = CDS data structure
XIX = Exposure number
YIX = Detector Y value
WIN_NO = window number
Opt. Inputs : None
Outputs : None
Opt. Outputs: None
Keywords : None
Calls : ***
GT_LAMBDA, GT_NUMWIN, GT_SPECTRUM, GT_WINSIZE, GT_WLABEL, PIX2WAVE, PSCLOSE [1]
PSCLOSE [2], PS_MINE
Common : None.
Restrictions:
Side effects: None.
Prev. Hist. : None.
History : Version 1, Peter Young, Cambridge University, 5 September 1996.
Contact : Peter Young, Cambridge University.
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Project : SOHO - CDS
Name : NIS_QUICKLOOK
Purpose : Allows a quick-look at CDS data
Category : Data analysis
Explanation : Upon running NIS_QUICKLOOK, the set of wavelength windows in
the data will be displayed. Choosing one brings up the
spectrum of this window averaged over the whole raster area.
Clicking on one of the wavelength pixels in this window
brings up an image of the observed region at this particular
wavelength.
If the option GET_PIX is given then one of the spatial pixels
can be chosen and the spectrum at this location can be
analysed - see also the routine NIS_PIX_ANALYSE.
Will still work with wavelength windows only 1 pixel wide -
the routine goes directly to displaying the image.
Any drop-outs in the data are assumed to have the value
-100, and will be re-set to the value -5 to ensure the
image is reasonably displayed.
There are many useful keywords - see below for details.
Syntax : NIS_QUICKLOOK, A, [, PIX3, GET_PIX, CLEAN, IMAGE=IMAGE
WIND=WIND]
Examples : NIS_QUICKLOOK, A
- basic operation
NIS_QUICKLOOK, A, /CLEAN, /REM_BACK, WIND=7
- clean the image of cosmic rays, remove background from
image, and use idl window 7
NIS_QUICKLOOK, A, IMAGE=IM, /GET
- save the displayed image to an array IM, and allow the
spectrum at a chosen image pixel to be viewed
Inputs : A = CDS quick-look data structure
Opt. Inputs ; WIND = The window that the image/spectra are sent to is by
default window 5. This keyword allows the
specification of a different window.
ADD_CONT = A contour plot of the same size as the displayed
image that will be overplotted on the displayed
image
EXPTIME = after vds_calib has been run on a data-set, the
y-scale can be rather small, so this routine
multiplies the displayed spectra by EXPTIME
Outputs : None
Opt. Outputs: IMAGE = The displayed image is sent to the array IMAGE, for
further manipulation in IDL.
Keywords : CLEAN = By default, the raw image is displayed. If CLEAN is
set, then a cosmic ray removal routine is used.
PIX3 = construct image from the sum of three wavelength
pixels, rather than just one
FILL = If set, all missing data pixels in the selected
data window will be filled using the FILL_MISSING
routine.
REM_BACK = If this keyword is set, then after the wavelength
is selected with the mouse, two additional
wavelengths can be chosen which are taken to
correspond to continuum on either side of the
chosen line. These "continuum images" are averaged
and subtracted from the "line images".
GET_PIX = once the image is displayed, GET_PIX allows an
image pixel to be chosen. The routine
NIS_PIX_ANALYSE is then called, allowing the
spectrum at that particular pixel to be viewed.
NISAT = tells NIS_QUICKLOOK that the data contains complete
NIS spectra, and so when the averaged spectra are
displayed a window can be selected with the mouse
Calls : ***
AVERAGE, CONTV, FILL_MISSING, GT_NUMWIN, GT_WINDATA, GT_WINSIZE, GT_WLABEL, NEW_SPIKE
NIS_PIX_ANALYSE, PLOT_IMAGE
Common : None.
Restrictions: Only works on 3-D arrays, i.e., (lambda,x,y). Won't work with
repeated exposures at the same location.
When using GET_PIX keyword, be careful using data containing
entire NIS wavebands. The chosen spectrum will not come from
a consistent spatial pixel (because of the slant in the NIS
spectra).
Side effects: None.
Prev. Hist. : None.
History : Ver.1 5-sep-96
Ver.2 18-jan-97 added REM_BACK keyword.
Ver.3 15-oct-97 tidied up the way routine handles missing
data.
Ver.4 18-nov-97 corrected error in the display of the
averaged spectrum
Ver.5 6-jan-98 added FILL keyword
Ver.6 20-may-98 added EXPTIME and NISAT keyword
Ver.7 2-sep-98 now calls new_spike to remove cosmic rays
Contact : Peter Young, Cambridge University (pry10@damtp.cam.ac.uk)
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Project : SOHO - CDS
Name : NIS_ROTATE
Purpose : Applies slant and tilt corrections to VDS images.
Explanation : Applies the slant and tilt corrections of VDS_ROTATE to all the
windows in a CDS/NIS data structure. The tilt values are taken
from GET_TILTCAL.
Use : NIS_ROTATE, DATA
Inputs : DATA = Structure variable as read by READCDSFITS.
Opt. Inputs : None.
Outputs : DATA = The calibrated data will be returned as a new
structure variable with the same format as the input.
Opt. Outputs: None.
Keywords : BILINEAR = Allows bilinear interpolation during rectification.
This is the default. If nearest-neighbor
interpolation is desired, then set BILINEAR=0.
CUBIC = Allows cubic interpolation during rectification
(NOTE: both of these change the intensity values.)
BOTTOM = If set, then the data is aligned so that the bottom
of the slit is aligned with the bottom of the array.
Ignored unless the data contains a full spectral
readout.
MIRROR_SHIFT = If set, then interpolate to take out the
spectral shifts due to the scan mirror.
ALIGN = If set, then the NIS-1 windows are moved to be
aligned with the NIS-2 windows.
CALLED BY:
MK_CDS_MAP
Note: Use of the /ALIGN keyword tends to broaden
cosmic rays. It's best to remove the cosmic rays
first, e.g. through CDS_CLEAN_EXP.
There is a small amount of smoothing which occurs
with the use of /ALIGN. This smoothing is not
significant compared with the actual instrument
resolution. However, one can avoid the smoothing by
setting BILINEAR=0.
If the observation is of the "sit-and-stare" type,
where the scan mirror never moves, then the
alignment will only be in the Y-direction, and the
X-direction offsets will be ignored.
ERRMSG = If defined and passed, then any error messages will be
returned to the user in this parameter rather than
depending on the MESSAGE routine in IDL. If no errors
are encountered, then a null string is returned. In
order to use this feature, ERRMSG must be defined
first, e.g.
ERRMSG = ''
NIS_ROTATE, ERRMSG=ERRMSG, ...
IF ERRMSG NE '' THEN ...
Calls : ***
ADD_TAG [1], ADD_TAG [2], DATATYPE [1], DATATYPE [2], DATATYPE [3], DELVARX [1]
DELVARX [2], DELVARX [3], DELVARX [4], FILL_MISSING, GET_MIRSHIFT, GET_TILTCAL
GT_NIS_ALIGNMENT, GT_WINDATA, GT_WINDESC, POLY, ST_WINDATA, TAG_EXIST [1]
TAG_EXIST [2], VDS_CALIB, VDS_ROTATE, delvarx [5]
Common : None.
Restrictions: Before this procedure can be used, the calibration for the VDS
detector must be applied, via the VDS_DEBIAS and VDS_CALIB
routines. If not already done, then this routine will attempt
to use the automatic facilities of those routines.
Side effects: None.
Category : Calibration, VDS
Prev. Hist. : None.
Written : William Thompson, GSFC, 6 February 1998
Modified : Version 1, 6-Feb-1998, William Thompson, GSFC
Version 2, 5-Oct-1998, William Thompson, GSFC
Added keyword MISSING to call to VDS_ROTATE
Version 3, 4-Dec-1998, William Thompson, GSFC
Call GT_WINDATA and ST_WINDATA with NOPAD.
This fixes problem when full spectral readout and
windows are mixed in the same study (e.g. SERTSCAL).
Version 4, 23-Sep-1999, William Thompson, GSFC
Added keyword MIRROR_SHIFT.
Take vertical binning into account.
Version 5, 30-Aug-2000, William Thompson, GSFC
Added keyword ALIGN
Version 6, 13-Oct-2000, William Thompson, GSFC
Fixed bug with advanced QLDS memory model
Version 7, 09-May-2003, William Thompson, GSFC
With /ALIGN, ignore X offset if sit-and-stare.
Version : Version 7, 09-May-2003
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Project : SOHO - CDS
Name : NIS_WAVECAL_DEMO
Purpose : Demonstrate NIS wavelength calibration.
Explanation : Demonstrates the data used to form the NIS wavecal. Pixel
values were derived from composite spectral atlas data
(study NISAT) by McWhirter, Brooks et al) and the wavelengths
are from the Chianti line lists.
Use : IDL> nis_wavecal_demo
Inputs : None
Opt. Inputs : None
Outputs : None
Opt. Outputs: None
Keywords : OLD - display pre-loss calibration
Calls : ***
AVERAGE, CIRCLE_SYM, POLY, POLY_FIT, STDEV, YES_NO
Common : None
Restrictions: None
Side effects: None
Category : Calibration, wavelength
Prev. Hist. : None
Written : C D Pike, RAL, 30-Jul-96
Modified : Updated for post-recovery data. CDP, 12-Nov-98
Version : Version 2, 12-Nov-98
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PROJECT:
SOHO - SUMER
NAME:
NLINE_DISPLAY
PURPOSE:
Display data stucture as movie
CATEGORY:
Data Display
EXPLANATION:
This Routine builds total of data and opens 2 windows, then
each image is displayed as spectra and total in wavelength and
in the second window the line profile
SYNTAX:
nline_display, instc
EXAMPLES:
ff=findfile('sumop1$dra6:[restore.20020411]sum_r*.11180_08')
ff=ff(0:400) ;~400 images because of memory
collect_images,'',oo,file=ff,/full;full image mode
nline_display,oo
INPUTS:
instc - data input structure (see collect_images in fullimage_ mode)
OPTIONAL INPUTS:
None.
OUTPUTS:
None.
OPTIONAL OUTPUTS:
None.
KEYWORDS:
step_ - contol execution bu keyboard (b - back,i - info,
q - quit, anykey - forward)
CALLS: ***
DATATYPE [1], DATATYPE [2], DATATYPE [3], UTC_HEAD, WAVEL
COMMON:
None.
RESTRICTIONS:
None.
SIDE EFFECTS:
None.
HISTORY:
Version 1, April 10, 2002, Dietmar Germerott, MPAE Lindau. Written
CONTACT:
Dietmar Germerott, MPAE Lindau (germerott@linmpi.mpg.de)
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NAME:
NLM
PURPOSE:
Shorthand for "N_ELEMENTS" (sounds like "EN-ELEM")
CALLED BY
FIELDLINE, GETV4TYPE, GREEN_POT_FLAT, MAKE_DIPOLES, MAKE_SYNOP, MREADGIF, NLINEAR
PIX2V4, PLOT_PTLIST, ROLL_PLOT, SUNEARTHDIST, V4, V4DIFF_ROT, V4HELP, V4OK, V4PRINT
V4XCARR2HEL, V4XFORM, V4XHEL2CARR, V4XSC2HC [1], V4XSC2HC [2], V4XSC2HEC
V4_RESOLVE_XFORM, ZCONTAINS, ZHDRUNIT, ZHOVER, ZINRANGE, ZLASCO_SUM, ZPAD, ZUNPAD
closest_time, cube_interp, equalize_rasters, find_launchpoints, fixinate_eit
fixinate_mdi, fixinate_trace, later, local_mag_extrap, make_grid_sphere
radial_bkg, struct_eq, trace_field, unpack_trace, zanytim2cds, zcheck_hdr, zcurs_ok
zdeheliographinize, zheliographinize, zmatch, zmontage, zmovie, zmovify, zpb0r [1]
zpb0r [2], zradialize, zscale, ztrack, zunits, zunspike, zunwrap
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NORM_WARN
Confirm the QUIT operation.
Usage:
iquit=norm_warn()
Arguments and keywords: none:
CALLS: ***
NORM_EVENT
History:
original: 19/1/95; SJT
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NAME:
NRL2EIT
PURPOSE:
To make a NRL formatted EIT FITS file compatible with EIT software.
CATEGORY:
FITS processing
CALLING SEQUENCE:
eithdr = nrl2eit(nrlhdr)
INPUTS: NRL formatted FITS header
KEYWORD PARAMETERS: none
OUTPUTS:
FITS header comptaible with EIT software.
CALLS: ***
ANYTIM2UTC [1], ANYTIM2UTC [2], EIT_FXPAR, EIT_PIXSIZE, FXADDPAR [1], FXADDPAR [2]
FXPAR [1], FXPAR [2]
CALLED BY:
EIT_PREP
COMMON BLOCKS: none.
SIDE EFFECTS: none.
RESTRICTIONS: none.
PROCEDURE:
The only changes needed are to add new keywords to the
header which already contains this info. The necessary info
is grabbed out and re-written.
MODIFICATION HISTORY:
Written by: J. Newmark Date. Oct 08 1996
2001.6.21, N.Rich - Fixed date_obs and object
2002.8.06 J. Newmark, fixed EXPTIME
2003.4.22, N.Rich - For MAP compatibility, Fixed date_obs AGAIN;
added CDELT1,2
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NAME:
NUM_TO_FUZZY
PURPOSE:
Converts a number to a fuzzy number
PROPCEDURE:
Converts a number (or array of numbers) to a fuzzy number (resp. array
of fuzzy numbers with the same dimensions)
A "fuzzy number" is a confidence interval around a given number.
Given 1 number a0 (highest confidence case) and a [min,max] interval
(lowest confidence case), the fuzzy number is an compromise beetween
[amin,amax] and [a0, a0] according to a confidence level (0 to 1) for
the number a0.
;
CALLING SEQUENCE:
afuzzy = num_to_fuzzy (a0, amin, amax, conf)
INPUTS:
a0 a non-complex number or array of numbers
amin the minimum value for a confidence level 0
amax the maximum value for a confidence level 0
conf a confidence level, ranging from 0 (no confidence in
the number a0) to 1 (total confidence in the number a0)
OUTPUTS:
A fuzzy number (structure with the form {low,high})
CALLED BY
FUZZY_BLOCK
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FUNCTION: nums2string
Converts an array of numbers to a space delimited list of numeric characters
INPUTS:
nums FIX,FLOAT,BYT ARR
OUTPUTS:
numstring CHAR
KEYWORDS:
DELIM Set = character to use as delimiter, default is ' '
AUTHOR:
Nathan Rich, NRL/Interferometrics, 2001
@(#)nums2string.pro 1.1, 11/08/01 - NRL IDL LASCO Library
CALLS:
CALLED BY
REDUCE_LEVEL_1